Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTGCAGAGTTCGGGCGAGA
..((.((..((..(((((((((&)))))))))..))....)).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330322
GeneSymbolHOXB3
Binding site224,247
Score0.846
Seed0
Au0.397
Energy-15.8
Binding len23
Me-17.082
Phylopstem6.273144666666665
Phylopflank4.6209226
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
Position5UTR
2D Structure