Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGGGGGCAACCTGGAGGTCTGAAAAGAGGAGCCAGA
..(((((((((((((((((...&.)))))))..........)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330323
GeneSymbolHOXB3
Binding site1288,1327
Score1.0
Seed1
Au0.412
Energy-25.5
Binding len29
Me-4.957
Phylopstem0.2401886888888889
Phylopflank0.2605546525
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure