Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTCATTGGAGCCAGGG
.((((((...(((((.((((((&)))))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330331
GeneSymbolRNF111
Binding site1457,1477
Score0.846
Seed1
Au0.456
Energy-22.1
Binding len20
Me-8.639
Phylopstem2.8776848333333334
Phylopflank3.4715358762500013
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure