Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCTTATGATTAAACCGAGGTTATAGAAGGTCAGGGGAGAGTGAAGGAGTCAGTGA
(((((((((((((((.(((...&.))).)).......................))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330331
GeneSymbolRNF111
Binding site5197,5254
Score0.846
Seed1
Au0.515
Energy-24.8
Binding len44
Me-4.171
Phylopstem-0.02143556052631581
Phylopflank0.16144775625000002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure