Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGACAGGTTGAAGCAAGTAGACGCCCAGGAGCCCCGGGAGGGGGCTGCAGTT
.(((((((((((((((((....&.)))))))))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330332
GeneSymbolCD70
Binding site21,74
Score0.846
Seed1
Au0.324
Energy-26.5
Binding len21
Me-3.793
Phylopstem-0.03926052631578946
Phylopflank-0.02441512083333332
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end4
Position5UTR
2D Structure