Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGAGGCAGGTGTGCCAAGGG
.((((((((((..(((......&.))).)))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330350
GeneSymbolUBIAD1
Binding site1394,1418
Score0.808
Seed1
Au0.456
Energy-17.9
Binding len17
Me-8.429
Phylopstem0.5235241818181818
Phylopflank0.13005433174999997
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end2
Position3UTR
2D Structure