Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330356
GeneSymbolBORCS5
Binding site5142,5175
Score0.923
Seed1
Au0.368
Energy-28.9
Binding len24
Me-10.109
Phylopstem-0.46600345454545455
Phylopflank-0.24387253749999996
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure