Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATCCAGAAGCAAGCACAT
...(((((..(((((((((((.&)))))))))))..))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330359
GeneSymbolKBTBD3
Binding site1338,1358
Score0.923
Seed0
Au0.618
Energy-19.5
Binding len20
Me-8.813
Phylopstem-0.33103605636363637
Phylopflank0.2912894344999999
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure