Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACCTCCAGGCCTTTGAGGAGGCCTCGTTCTATGCCAGGA
.(((((((((.((((..(..((&.))..)..)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330364
GeneSymbolSMYD1
Binding site1086,1127
Score0.846
Seed1
Au0.441
Energy-18.3
Binding len23
Me-6.851
Phylopstem3.3440164444444442
Phylopflank3.737870175374999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure