Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCATGAGGTTGTGAAATTATGCCGGGAGTGCCTGGAGAAGCAGGAGCCAGTGT
((((((((((((((((((((..&.)))))))))....))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330364
GeneSymbolSMYD1
Binding site975,1028
Score0.923
Seed1
Au0.456
Energy-31.0
Binding len26
Me-3.938
Phylopstem4.646524458333334
Phylopflank3.533586812125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure