Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGGCTGTGGACCGC
...(((.(((..((((((((((&))))))))))....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330365
GeneSymbolZNF561
Binding site56,77
Score0.846
Seed0
Au0.471
Energy-21.4
Binding len21
Me-14.23
Phylopstem0.2553054
Phylopflank-0.01969274100000001
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end8
Position5UTR
2D Structure