Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGCCTGGAGCTGGG
..((((((((...(((((....&)))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330370
GeneSymbolLRRTM4
Binding site1944,1961
Score0.846
Seed1
Au0.338
Energy-21.9
Binding len17
Me-12.418
Phylopstem4.451494625
Phylopflank4.6103781999999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure