Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTCAGAAAGAAGTCAGTT
.(((((((.((((((((((...&))).))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330375
GeneSymbolHLF
Binding site2615,2635
Score1.0
Seed1
Au0.632
Energy-23.3
Binding len20
Me-4.85
Phylopstem1.6431654272727274
Phylopflank1.5149545774999997
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure