Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGCTGCCTTAAGGAGGTAGTTTGTTGAGGGGAGGGCTGTAGA
.....(((((((((((((..(&.)..))))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001330375
GeneSymbolHLF
Binding site4004,4048
Score0.962
Seed0
Au0.529
Energy-26.6
Binding len18
Me-13.666
Phylopstem-0.007013407692307693
Phylopflank-7.167875000001211e-05
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure