Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGAGCCTGGCATTATGGGGACCAT
...((((((((((((((((((.&)))))))))))...........)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330377
GeneSymbolPCTP
Binding site668,699
Score0.923
Seed0
Au0.485
Energy-23.5
Binding len31
Me-6.515
Phylopstem-0.3410712533333334
Phylopflank0.51452544875
Longest consecutive pairings11
Position of longest consecutive pairings20
Pairings in 3prime end7
Position3UTR
2D Structure