Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGTTAGGGAGCCT
....((((((((.((((((...&))))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330377
GeneSymbolPCTP
Binding site1228,1245
Score0.923
Seed0
Au0.603
Energy-22.7
Binding len17
Me-10.836
Phylopstem-0.12652900000000003
Phylopflank-0.13796519
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure