Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATTGGGATGTCTGGAGCCAGG
..((((((((..(((.(((...&))).))).....)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000019
GeneSymbolACAT1
Binding site1198,1219
Score0.923
Seed1
Au0.529
Energy-20.1
Binding len21
Me-11.362
Phylopstem3.51837675
Phylopflank2.9404418525000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure