Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAGAGTATGCCAA
...((((((((..(.((((...&)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000036
GeneSymbolAMPD1
Binding site1952,1967
Score0.846
Seed0
Au0.662
Energy-15.2
Binding len15
Me-11.886
Phylopstem1.498782125
Phylopflank2.3612456450000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure