Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGCGCTCCTGGCCTCTGCCCGAGCTTCAGAGGCCGAGGATGCCTCCCTTCTCAGCTTCATGCAGGGTTA
.((((((((((((((......&.)))))..........................))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_000040
GeneSymbolAPOC3
Binding site81,151
Score0.923
Seed1
Au0.397
Energy-20.1
Binding len42
Me-4.026
Phylopstem0.48749639999999983
Phylopflank0.6187345743125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure