Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGAGCCC
....((((((.((((((((...&)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000068
GeneSymbolCACNA1A
Binding site6307,6322
Score0.846
Seed0
Au0.324
Energy-25.5
Binding len15
Me-12.371
Phylopstem6.088882125
Phylopflank4.783096008625
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure