Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGTGAGTGCCGGGG
.((((((((.((.(((......&))).)).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000069
GeneSymbolCACNA1S
Binding site859,875
Score0.846
Seed1
Au0.309
Energy-17.9
Binding len16
Me-6.325
Phylopstem0.29683957499999997
Phylopflank0.47666031275000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure