Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATGCTCTGTGCCT
....((((((..(((((((...&)))))))....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000069
GeneSymbolCACNA1S
Binding site4177,4195
Score0.923
Seed0
Au0.529
Energy-16.0
Binding len18
Me-15.718
Phylopstem3.8287727142857144
Phylopflank5.31230307625
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure