Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GCGGGACCAGAAGTGAA
.....(((((((((((.(((.&)))..))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_000071
GeneSymbolCBS
Binding site1790,1807
Score1.0
Seed0
Au0.294
Energy-18.8
Binding len17
Me-13.666
Phylopstem3.7988946363636362
Phylopflank4.225636691249999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure