Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGATGATTGGGTCAGC
..(((((((...(((((((.((&))))))))).....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000074
GeneSymbolCD40LG
Binding site188,210
Score0.846
Seed1
Au0.618
Energy-20.8
Binding len22
Me-12.371
Phylopstem1.8889841428571426
Phylopflank-0.06815593875
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure