Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTAACCAGGTATAGGCCAGAAAGGAGGTGGCCCAGTC
.((((((((((((((((.(...&.).))))))))))).....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000084
GeneSymbolCLCN5
Binding site8492,8532
Score1.0
Seed1
Au0.441
Energy-25.2
Binding len25
Me-3.793
Phylopstem1.8828035238095238
Phylopflank0.9419811112499998
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end4
Position3UTR
2D Structure