Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCTCAGAACTGGGTAGCCAA
...(((((((((((((((((((&)))))))))))..))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000084
GeneSymbolCLCN5
Binding site4380,4403
Score0.923
Seed0
Au0.735
Energy-23.5
Binding len23
Me-6.515
Phylopstem0.20984264090909088
Phylopflank0.5177079274999999
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure