Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTGGATATCAAGAACTTTGGGGCCAAAGTGG
((((((((((..(((((((((.&))))))))).............)))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000085
GeneSymbolCLCNKB
Binding site516,551
Score0.846
Seed1
Au0.412
Energy-24.8
Binding len35
Me-10.109
Phylopstem4.069948090833333
Phylopflank2.2317371408749995
Longest consecutive pairings9
Position of longest consecutive pairings26
Pairings in 3prime end7
PositionCDS
2D Structure