Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTGGGCCGTGTGCGCACCACGACCATCGGGGAGCCT
....(((((((((((((((((.&)))))))))......................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000085
GeneSymbolCLCNKB
Binding site639,679
Score0.846
Seed0
Au0.426
Energy-22.8
Binding len40
Me-9.547
Phylopstem0.3548897948717949
Phylopflank2.04226956925
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end7
PositionCDS
2D Structure