Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTGGTCAGAGAGGAGAGAGAGGCTTCCCTGGTCTTCCTGGCCCCTCTGGTGA
(((((((((((((((((.(((.&.))).)))))))))))..............................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000088
GeneSymbolCOL1A1
Binding site3004,3060
Score0.923
Seed1
Au0.412
Energy-24.3
Binding len53
Me-3.938
Phylopstem3.300379863829787
Phylopflank3.4881962525
Longest consecutive pairings11
Position of longest consecutive pairings37
Pairings in 3prime end6
PositionCDS
2D Structure