Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGCCAGGTC
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000090
GeneSymbolCOL3A1
Binding site3006,3016
Score0.923
Seed1
Au0.324
Energy-15.3
Binding len10
Me-14.466
Phylopstem2.0539191111111115
Phylopflank2.6727312687499998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure