Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATGGGCATGCCAGGTT
(((((((((.(.((((......&)))).)..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000091
GeneSymbolCOL4A3
Binding site3158,3176
Score0.846
Seed1
Au0.515
Energy-17.6
Binding len18
Me-8.527
Phylopstem2.8284808888888886
Phylopflank1.4839186847499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure