Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTGCGTGAAGTATAGCTAGA
..(((((((((.((((((((((&))))))))))...)))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000092
GeneSymbolCOL4A4
Binding site5350,5374
Score0.846
Seed1
Au0.5
Energy-18.7
Binding len24
Me-8.304
Phylopstem1.8316176
Phylopflank1.11733317625
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure