Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CAGGGTGAGCCAGGTT
(((((((.(((..((.......&))..))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000092
GeneSymbolCOL4A4
Binding site3447,3463
Score0.846
Seed1
Au0.456
Energy-17.4
Binding len16
Me-11.12
Phylopstem0.6723742857142857
Phylopflank0.6123238487499998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure