Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGGGTTTGCCAGGA
.(((((((.((..(((((....&)))))..)).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000093
GeneSymbolCOL5A1
Binding site4069,4087
Score0.846
Seed1
Au0.324
Energy-23.0
Binding len18
Me-9.486
Phylopstem5.095944
Phylopflank5.3280068375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure