Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGGTCCTCGAGGAGTCAAGGGGGCCGATGG
((.((((((((((((((((((.&)))))))))..............))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000093
GeneSymbolCOL5A1
Binding site2745,2781
Score0.846
Seed0
Au0.353
Energy-27.8
Binding len36
Me-5.495
Phylopstem3.589092128125001
Phylopflank3.847646437500001
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure