Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGAGGGGCAGCCAGG
..((((((((((((.((((...&)))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000093
GeneSymbolCOL5A1
Binding site7576,7594
Score0.846
Seed1
Au0.397
Energy-25.6
Binding len18
Me-5.692
Phylopstem-0.08685671538461535
Phylopflank0.32337693624999986
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure