Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGGCTGCAGGGTTTG
((((((((((((...(((((.&))))))))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_000093
GeneSymbolCOL5A1
Binding site4063,4081
Score0.846
Seed1
Au0.338
Energy-30.5
Binding len18
Me-6.819
Phylopstem5.6803915
Phylopflank5.2415331625000015
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure