Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTGGTTACTGCAGCAGCAT
.(((.((((((((....((((&)).))....)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047428711
GeneSymbolRASSF3
Binding site3190,3212
Score0.846
Seed0
Au0.588
Energy-18.7
Binding len22
Me-9.738
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure