Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGTGTATTGTCCAAAGGGCCAGA
..(((((.(((((((((((((.&))))))))..........)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000094
GeneSymbolCOL7A1
Binding site3800,3829
Score0.846
Seed0
Au0.382
Energy-26.7
Binding len29
Me-7.271
Phylopstem2.6560747826086955
Phylopflank2.4117383500000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure