Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCTGGGAGAGAGGACATACTATATCGCAGCAGTGG
((((((((((((((((((((((&)))))))...))))))))...........))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000096
GeneSymbolCP
Binding site2216,2255
Score0.846
Seed1
Au0.5
Energy-23.7
Binding len39
Me-3.938
Phylopstem0.19501099999999982
Phylopflank3.07419412775
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end8
PositionCDS
2D Structure