Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTAATCCCAGCTGCT
..(((((((.(((((..((((&)))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347869
GeneSymbolZNF174
Binding site2646,2665
Score0.846
Seed1
Au0.382
Energy-21.1
Binding len19
Me-6.433
Phylopstem0.07416900000000003
Phylopflank0.1252802749999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure