Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTACAGAGCTGTGCCAGGG
.((((((((((..((((.(...&).))))..).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000097
GeneSymbolCPOX
Binding site1165,1185
Score0.923
Seed1
Au0.485
Energy-20.3
Binding len20
Me-8.429
Phylopstem-0.4333486272727272
Phylopflank0.045681781250000025
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure