Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTCTGGAGACCCAGGCCCAGGTGTGCCAGGC
.((((((((((...((......&.))....)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000097
GeneSymbolCPOX
Binding site571,604
Score0.846
Seed1
Au0.338
Energy-19.1
Binding len18
Me-9.286
Phylopstem-0.0780598
Phylopflank0.42593008374999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure