Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGGGCTGCAGCATGCT
..((((((((((((.(..(((&))).).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047428744
GeneSymbolSLC6A9
Binding site139,159
Score0.846
Seed1
Au0.309
Energy-22.5
Binding len20
Me-5.692
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
Position5UTR
2D Structure