Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGCCAGT
..(((((((((...........&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000112
GeneSymbolSLC26A2
Binding site5581,5591
Score0.923
Seed1
Au0.588
Energy-16.2
Binding len10
Me-11.418
Phylopstem-0.11916792222222222
Phylopflank-0.045590152500000036
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure