Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCATTGTGTTTTGCCATTCATGGG
.((((((((((((((((((...&)))))))))))...))))).....)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000124
GeneSymbolERCC6
Binding site7964,7991
Score0.846
Seed1
Au0.544
Energy-17.9
Binding len27
Me-3.793
Phylopstem2.7887684961538466
Phylopflank2.3954464987499997
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure