Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACTTGGAAGAGGCCAGA
..((((((.(.(((((((((((&)))))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000127
GeneSymbolEXT1
Binding site4381,4401
Score0.846
Seed1
Au0.632
Energy-22.3
Binding len20
Me-8.838
Phylopstem-0.19701623636363638
Phylopflank-0.2707642824999999
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end8
Position3UTR
2D Structure