Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGGGGGTGGGGGGA
...((((.((.((((((((..&)))))))))).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_000127
GeneSymbolEXT1
Binding site3706,3722
Score0.923
Seed0
Au0.647
Energy-23.7
Binding len16
Me-11.653
Phylopstem0.1161967625
Phylopflank0.22884747999999996
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure