Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAGGGTACTGCCAGGG
.((((((((((..(((......&)))..))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_000137
GeneSymbolFAH
Binding site1232,1249
Score0.846
Seed1
Au0.426
Energy-19.3
Binding len17
Me-8.429
Phylopstem3.6156196363636357
Phylopflank3.67240505
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure