Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGAAGGCCAAGGTCTTGTTAAGGGGCTACTGG
((.((((((((((((((((...&))))))))................)))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_000139
GeneSymbolMS4A2
Binding site875,911
Score0.846
Seed0
Au0.529
Energy-20.4
Binding len36
Me-5.495
Phylopstem-0.043557037500000007
Phylopflank0.06112675749999995
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end5
Position3UTR
2D Structure